CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_140149
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_140149
T138610_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_140149
C2H2 ZF
16
38
YQCSHCGYQTTRKCSLDRHKKSH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
44
66
FKCEHCDYSTNSEQYLEVHQMKH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
73
95
YLCGECGYSTGSKSQFTTHSRTH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
101
124
FKCDKCDFSASQKVQLDRHQKRHH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
166
187
VECDVCGQTISQQSLEAHMKTH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
255
277
HRCQDCGYIALNKSCLTRHMRTH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
283
305
FKCSLCNYATTQSCHLDRHMDWH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
313
335
FACRTCKYRAYSRSTLEEHERIH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
341
363
FKCDRCNFSTAHKKCLRTHMSKH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
397
418
CACSRCGYKASSKGDLTQHIAI
estExt_fgenesh2_pg.C_140149
C2H2 ZF
701
724
YSCNVCGLSTSSDSALRKHKIQDH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
730
752
FSCSHCKYKTKQKVQLERHMRHH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
758
780
FKCDQCNFTTAYEQSFKQHLVTH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
786
808
FACPECDFTAKYKPQLARHMMSH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
824
846
FLCEECGFCAFNSTSFKRHVRSH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
852
874
FKCELCDFATAQKSHLKRHMSWH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
910
932
FKCHLCDFASGHKRSLEQHLARH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
938
960
FTCDTCGFQTAESSQMTLHKRKH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
966
988
LQCDQCKYSTVWPSNFKTHMHKH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
994
1017
HRCHLCNFKSTDKSEVAIHRETVH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
1022
1044
FKCTFCDYATNYKKSLTLHLMTH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
1078
1100
FACDLCPYKSVKKSALTRHMKKH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
1106
1128
YQCDQCGFRASQKETINRHLERH
estExt_fgenesh2_pg.C_140149
C2H2 ZF
1134
1155
FQCCKCGLKTGTASKLKKHQEV
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found