CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_1510046
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1510046
T138616_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
129
151
YRCGQCEYSTANRSYLSLHKKVH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
157
179
YSCDLCDVCTAKKGDMDKHKATH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
185
207
YTCEVCGVRMGSKSNLWIHMKTH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
213
235
YGCGECEYTTFVKSNMMVHMDVH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
241
263
YKCDQCDFSTAWKGSLDTHKKRH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
269
291
FMCGVCGHRAAQKAAISQHMKTH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
325
347
YMCGECGFRTVYKHSLAKHMTTH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
356
379
YRCPLCDYSAVQRKVLEAHVMSKH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
385
407
YACTECGFRTAHQSGLSRHMDTH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
413
435
YKCDQCDFCAVRKDRLDRHRATH
estExt_fgenesh2_pg.C_1510046
C2H2 ZF
441
463
FVCNKCGYRTTSRSHLSKHFTTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found