CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1510082
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1510082
T138617_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
89
111
YKCEQCDYCTASKGTLSMHMAKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
117
139
YRCGECGFRTGHRSALSSHMKIH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
145
167
YKCDLCDYCTALKVQLEIHMAKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
173
195
YMCGECGFRTGDKSALSTHMNIH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
226
248
YMCGKCGYRTAYSDDLSSHMKTH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
254
276
YKCDQCGYCTDKKWSLDKHVATH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
341
363
YKCDQCGYCTARKRVLDRHRIKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
369
392
YMCGECEYTTDNQSSLTIHIKMVH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
398
420
YKCDQCGFRTARKGDLDTHTAEH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
426
448
HLCEKCGYRTADKIQLSGHMRMH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
453
475
HQCDQCDYITAFKSTLDNHKLKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
481
503
YMCGECGYRTSLKSDLSKHMKIH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
509
531
YKCDQCDYSVFRKGAFTLHMAKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
537
559
DKCEKCGYRTADKIQLSSHLKTH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
594
616
YICTECEYRTGYQSALSNHMKKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
622
644
YKCEHCDYRTARQGYLDKHMAKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
650
672
YKCDWCGYSTARKGYLAKHMAKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
678
700
YKCYQCAFCTSRKSALIQHMVKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
706
728
YMCGECGFRTGFKPALSKHMKKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
734
756
YKCDQCDYRTARKGCLDKHMAKH
estExt_fgenesh2_pg.C_1510082
C2H2 ZF
762
783
YKCDQCDFCAAKQGQLEKHIDT
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found