CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1520096
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1520096
T138619_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
38
60
YQCDQCPYLSENRFALIRHYRTH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
66
89
FKCKHCPSAFAQAYDLKRHSMAIH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
95
118
HKCPKCEFECLRKANLVAHIRRAH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
124
148
FKCSYGKCSYSTTTKKYLQVHMAIH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
154
176
YQCSKCEYKCPHQWILTRHMRKH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
310
332
FQCDMCGFAFTHNWLLQRHIKTH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
361
383
FKCEECGFAFIQNWLLQRHLRSH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
492
514
FQCNVCEFSTRNRKDYVTHVQEH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
519
541
HHCSFCSLTFESGIGLSNHIRGH
estExt_fgenesh2_pg.C_1520096
C2H2 ZF
547
570
YRCDHCPFSTNQRRVLERHVKRSH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found