CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1670090
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1670090
T138630_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
2458
2480
FNCEECGFSTYRRETLRTHMRIH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
2486
2508
YACSFCPYRARQKPNLNTHMQFH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
2514
2536
FTCKYCSYSTSNKASTRLHETLH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
2999
3021
YECHSCDYQSKDLCALKRHLRTH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3055
3077
HKCPHCSYSVRNTSALAKHIKWH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3239
3261
FECGTCGYMTTSQERLSKHMITH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3267
3289
QSCDICPYKTRQSRTLWKHMKHH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3692
3714
YECQICDYTSEDKSRLVKHQRTH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3720
3742
YSCRFCPYKTALNESLWKHMKHH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3800
3822
FQCNMCGYMALDRSKLIKHLQSH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3828
3850
FSCPSCPYRSSSKENVKRHQKHH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
3997
4019
YTCNLCPFRARQQREYENHLSGH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
4025
4047
FQCPQCSFSAKENRGLSSHLRVH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
4253
4275
LQCKECPYETSDTRCLNNHMKHH
estExt_fgenesh2_pg.C_1670090
C2H2 ZF
4281
4303
IKCTKCSYSTDLQHLLEKHLKVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found