CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1770060
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1770060
T138635_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
28
48
CECDEKFTNRASYHKHILEAH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
50
72
VTCDYCEEKFHSAKTLQKHLKTH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
114
139
FKCDVKNCASAFKTKGALKNHVRKVH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
144
168
FPCQYEGCEKTFGIKSVLLKHYKVH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
174
196
HQCSYCGRMFQRTDHLKVHMRQH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
202
225
FNCSLCNYSGRQSNCLIWHMKTHH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
780
805
YECVVNNCKATFRNRAAVQNHIATVH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
810
834
FPCPHEGCKQTFGEKSRLKSHYKVH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
840
862
HQCSYCGKMFRRSEHMRVHMRIH
estExt_fgenesh2_pg.C_1770060
C2H2 ZF
868
891
FNCSLCNYSGRQYNSLRWHMKTHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found