CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2100026
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2100026
T138659_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
248
270
FICDLCSLMFITESDLAQHIKTH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
307
329
FICKECGFSTNHRGKLIAHAKTH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
335
357
YKCDQCTFSSVKKKTMDRHMLKH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
363
385
FKCRDCAFTTSDIKDMEKHIGTH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
389
412
YNCELCPFSAVMKKTLERHLKMKH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
723
745
HKCKDCSYSTAYKSDLRQHMYKH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
751
773
FECKVCGYKAARQKEMVQHSRIH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
779
801
FKCDQCDFSTAQSSTLKVHKMRH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
812
834
FKCKECDYSTAHRADLRQHMFRH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
868
890
FKCDQCDFSTTQRNSLKEHKMRH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
896
918
HMCDVCGLRFYTKPNLNAHMNRH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
929
952
HKCDKCKYATAHKTHLAIHVARYH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
958
980
HMCEYCGYRTVDRSNLATHKKTH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
986
1008
FKCDLCDYSSVAKKKLQQHMSKH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
1028
1051
HICPDCGHKTAHRSNLLSHMRKIH
estExt_fgenesh2_pg.C_2100026
C2H2 ZF
1060
1082
LKCDQCDYRTAKTSSLKSHMVKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found