CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2100033
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2100033
T138662_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
345
367
FPCTQCGRNFSTKQGLERHIRTH
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
373
395
YKCSHCGKQFTTSTNMRRHERLH
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
401
424
HVCPECDHAFIQKGDLKKHMVSQH
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
1041
1063
FKCNVCHTPFKSMKDMNQHVAAH
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
1098
1121
FMCSLCNREFGFLGNLQNHQRDVH
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
1334
1355
HKCPGCQKNFSHFSNLQRHLLV
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
1387
1408
HMCSNCKRSFTYLASLRKHQQS
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
1653
1675
FICGDCGSEFRAKCHLVRHSSVH
estExt_fgenesh2_pg.C_2100033
C2H2 ZF
1680
1703
YKCKICHHSFAAQHNYDNHMRLRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found