CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2540036
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2540036
T138678_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
96
118
YMCGKCGYRTAEKSDLSSHMKTH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
126
148
YKCDQCDYCTDRKWSLELHKVKH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
154
176
YVCVLCGFRTGFSSNLSSHMRLH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
182
205
HKCDQCGYCTARRGDLDMHKANKH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
211
233
YICGECGYRTAYSSTLSSHMKKH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
239
261
HKCDQCDYCTVRKEHLPLHMAKH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
370
392
YKCEQCDYRTASKSTLDTHMAKH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
398
420
YVCGECGFRTGYKSHLASHMKAH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
426
448
HQCDYCDYSSVRKRDLDAHLAKH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
454
476
YLCWQCGYRTADRSSLRKHVKIH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
482
504
HRCQLCEYSTARKGDLDRHMVQH
estExt_fgenesh2_pg.C_2540036
C2H2 ZF
510
533
YMCGKCEYTTDNQSNLTKHIKMIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found