CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2680009
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2680009
T138684_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
7
29
YKCKECVYSTAKKSDLTRHMRRH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
53
75
FMCGECGYRAPYKSWLVAHMRTH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
81
103
FKCNHCNYKASSKKYLVQHMKRH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
109
131
YSCELCDYQTYRKSDIERHMMCH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
137
159
YKCEECDYKTCQKTNLTRHGRLH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
176
198
FMCGECGYRACDQRRLVEHMGTH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
204
226
FKCNHCNYKSSFRNKLVEHMKRH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
232
254
YSCELCDYQAYRKSHIERHMMRH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
260
282
YKCEECDYRTAQKANLTRHRRQH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
288
312
YSCQECDYKTTDRSTLAKHMRSKHH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
311
333
HHCDICDYKAYRKSKLEIHMMCH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
339
361
YKCEECEYRTADKANLYKHRRLH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
383
405
FICGECGYRARLKYRLVEHMRTH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
411
433
FKCNHCNYKTSLKRTLDEHMKRH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
467
489
YKCEECDFRTAHSTALTRHRRCH
estExt_fgenesh2_pg.C_2680009
C2H2 ZF
495
518
YSCQECDYKARVKCNLLKHMKRKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found