CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2710011
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_2710011
T138686_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
1
22
MCNHCDYSTSSKFQLDRHVRKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
28
50
YKCDQCDYSAALKKTLNQHLAKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
56
78
YMCGECGYRAAKKSHLSQHMKTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
113
135
HMCGKCGYSTHLKSNLNNHMRTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
141
163
YKCDQCDFSSAHKCSLDKHLATH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
169
191
YMCGECGYRAAQKSQLSRHMVVH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
197
219
HKCDQCDFSAAEKFMLDQHLMKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
225
247
YMCGECGYRAARKYHLSRHMRTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
253
275
YKCDQCDYSAAQKCHLDQHLAKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
281
303
YMCGECGYRTAWKSNLSRHMVVH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
309
331
YKCDQCDYSAAQKCHLYQHLAKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
417
437
SPHCGFTTRHRYVLTRHKRTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
443
465
YKCDQCDYSAQQKDSLDMHQAKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
471
493
YMCGECGYRTRHRQSLYLHKRTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
499
521
YKCNLCDYSAAQKAALNSHMARH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
527
549
HVCEECGYSTGDRSSLYRHMKTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
555
577
HKCEHCDYAAAAKASLDIHMAKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
583
605
YLCGECGFRTAKKGDLSRHRRIH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
611
633
FKCDQCDYSAAQKYNLDIHLANH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
639
661
YVCWECGYRTAIRSNLTRHIRVH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
667
689
FKCDECDYSAFKKSSLDKHKAKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
715
737
YICTECNYRTAKKSHLSRHIKTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
743
765
YKCDQCDYSAAQKTALDDHLIKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
771
793
FKCGECEYRTDDRSCLSRHTKTH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
799
821
YVCALCDYSASRKSSLDEHMTKH
estExt_fgenesh2_pg.C_2710011
C2H2 ZF
827
849
YICGECGFGTARRYVLLRHKKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found