CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_320123
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_320123
T138694_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_320123
C2H2 ZF
72
94
FVCAECDYRAISKSVLSKHTRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
100
122
FKCDQCDYAAAQKEHLKRHMTKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
156
178
FRCDHCDYSAAQKSNLDQHMVRH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
208
230
FKCGECGYRTVRKSSLVTHMKRH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
264
286
YMCGECGYRTAYQSDLNIHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
292
314
YKCDQCDYAAARKKYLDRHKAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
320
342
YMCGECGYRAADKTALTLHMRKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
348
370
YKCDLCDYSATQKGDLDKHMAIH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
376
398
YMCGECGYRTARKSSLSRHVIKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
474
496
FVCMECDYRAAKKANLLRHKRKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
502
524
FKCDQCDYSAAHKVSLDLHLTKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
530
552
FMCGQCKYRTANRSHLSVHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
558
580
YKCDLCDYSAKTKDHLDDHMARH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
586
608
YMCGECGFRTASRSHLSVHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
614
636
YKCDLCDYSAAQKGHLDNHMARH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
642
664
FMCGECGYRTASKSDLSRHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
670
692
YKCNQCAYSAARKGQLDRHMTKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
698
720
YKCDQCVYSAATNSSLDQHMAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
725
746
MCGECGYRTAERSNLTVHMRKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
752
774
YKCDLCDYSATQKGHLDEHMARH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
780
802
FMCGECGYRTASKSDLSRHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
880
902
FVCTECDYRAATRTNLIIHTRKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
908
930
YKCDQCDYSAAQKGNLDQHMTKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
936
958
YKCDECDYSAAQKGRLDRHMAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
964
986
FMCGECGYRTANMSSLTRHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
992
1014
YKCDQCDYSTARKSHLNRHIAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1020
1042
LMCGECGYRTADRSVLTVHMKTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1048
1070
YKCDQCNYSTAQKGNLDRHMAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1076
1098
FMCGECGYRTADRSALKSHMGKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1104
1126
YKCDHCDYSTAQKSHLDRHLAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1132
1154
FMCGECGYRTADRSYLTVHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1160
1182
YKCDQCEYSAERKIYLDRHLAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1188
1210
FMCGECGYRTADKRALTVHMRKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1216
1238
CKCDRCDYSTARKNDLDLHMAKH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1244
1266
FMCGECGYRTARKSDLSRHMRTH
estExt_fgenesh2_pg.C_320123
C2H2 ZF
1272
1294
YKCDQCDYSVTDKRCLKKHIVTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found