CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_3310020
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_3310020
T138695_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
37
59
YTCDKCGYSTTVQSTMFTHMRTH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
65
87
FVCGECGYRAADKGNVSKHMKIH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
93
115
YMCEECGYRGADKKAMDRHVRTH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
121
143
FACGKCNYRAARKSTLTLHMRTH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
149
171
FACGECGYRSAVRSTMDVHMRIH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
177
199
FVCGECGYMAARKGSMNRHIKTH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
205
227
FVCGKCDFRTTRKSNLDVHARTH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
233
255
FACPDCDYRTADKSSMNKHARIH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
261
283
YTCGECGHKMTLKSTYTRHMRTH
estExt_fgenesh2_pg.C_3310020
C2H2 ZF
289
311
FVCMVCGYRAAQQGTMDRHMMTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found