CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_340150
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_340150
T138697_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_340150
C2H2 ZF
26
49
FKCDQCDYSAAQKARLTKHIAAKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
55
77
YMCGECGYRASQKSDLSKHMTAH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
83
105
YKCGECGYRSAYKCNLSQHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
111
134
FKCGQCDYVAVNKSYLDIHTVEKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
140
162
YICGQCGYKATNKGNIAKHVRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
168
191
YKCDQCDYSATQKSHLNRHVATKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
197
220
YMCGECGYRTAVKHLLAQHMLRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
226
249
LKCDQCDYSTSHKYLLKRHIATRH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
255
277
FKCEDCGYKTAYKCALFLHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
283
305
YKCDQCDYSAGRKSHLDNHLASH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
311
333
YICEQCGYRTTEKYRLSQHMKTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
339
361
YKCDQCDYSAAEKSNLKRHLVKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
367
389
YMCGECGYRTTEKSNLTKHLRVH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
399
421
YMCGECGYRTEKKSILVKHMRKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
584
606
YMCGECGYRAAQKYHLSRHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
612
633
FKCDQCDFSAAQKSTLDKHLAK
estExt_fgenesh2_pg.C_340150
C2H2 ZF
650
672
FMCEECKYKTSKEKRFFKHMRIH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
677
699
FKCHQCDFSAAQKSILDKHLVKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
705
727
YMCGECGYRAAHRSNLSQHMKTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
761
783
YMCGECGYRATLKPLLSRHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
789
812
YKCDQCNYSAAQKGTLDQHIAAKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
818
840
YMCGECGYRSAYKSGLYRHMKSH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
846
869
YKCDQCDYSVAQKSTLDKHIAAKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
875
897
YMCGECGYSTTYSSTFSNHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
931
953
YMCGECEYRTVRKSNFSDHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
959
982
YKCDQCDYSAILKSYLNKHISRQH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
988
1010
YMCGECGYRAACKSDLSKHMAKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1016
1038
YKCDQCDYSAVRKCHLDEHIARH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1044
1066
YMCGECGYRTVKKSRLSIHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1072
1094
YKCDQCDYSAALKSRLNEHIARH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1100
1122
YMCGECGYRAANKSRLAIHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1128
1150
YKCDQCDYSAAEKSALTRHLFKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1156
1178
FTCGECGFKTDSNSHLSRHMRTH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1186
1208
YKCDQCDYSAAQKCDLDKHLVKH
estExt_fgenesh2_pg.C_340150
C2H2 ZF
1214
1236
YICGECGFRTGRKSDLFRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found