CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_340157
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_340157
T138698_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_340157
C2H2 ZF
50
72
YMCGECGYRTAYRSHLSRHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
78
100
YNCDQCDYSFAVKHQLIDHQTRH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
106
128
YMCGECGYRAAQRSTLSRHMRSH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
162
184
YMCGECGYRTDRKSHLSRHTRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
190
212
YKCDQCDYSAARKSTLDYHLVKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
307
329
HICWECGYKTVQKSDLSKHMKTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
335
357
YKCDQCDYSAAHKSHLDRHLRKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
363
385
YMCDECGYSAFHKSDLSRHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
417
439
YMCGECGHRTASKSRLSLHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
445
467
YKCDQCDYSAAQKSSLDQHLSKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
479
501
YKCDQCDYSAAQKSSLDQHLSKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
507
529
YMCDECGYSAFHKSDLSRHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
535
558
YKCDQCDYSSAHKSALDRHLVVKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
564
586
YMCGECGHRTAFKSRLSLHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
592
614
YKCDQCDYSAAQKSSLDQHLSKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
620
642
YMCGECGYRTASKSHLSLHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
648
670
YNCDQCDYSVAHKSHLDRHLRKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
676
698
YMCGECGYRTAQRCTLSLHMKTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
704
726
YKCDQCEYSAARKSTLDKHLRKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
732
754
YMCGECGFRTTHKESLSRHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
760
783
YKCDQCDYSAARKSTLDNHTVAKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
789
811
YICGECGYRAVHKSDLSKHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
817
839
YKCDQCDYSAAQKSTLDQHLRKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
845
867
YMCGECGYRTAQKSNLSTHMRTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
873
895
YKCNQCDYAAARKSTWDIHLAKH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
901
923
YMCGECGYRAAQRSNLSRHMKTH
estExt_fgenesh2_pg.C_340157
C2H2 ZF
929
950
YKCDQCDYSAAQKSTLNKHGHT
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found