CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_340199
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_340199
T138700_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_340199
C2H2 ZF
180
202
YMCGECGYRTTYRSHLSQHMRTH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
208
230
YKCDKCDYSAAQKGELNKHIAKH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
236
258
YMCEVCGYRTAQRCNLSRHMRTH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
275
297
YMCGECRFRTADKCKLSRHMRIH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
303
325
YKCDQCDYSAAEKSTFDKHLMKH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
331
353
FMCGECWYRTTQKSHLSRHMKTH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
359
381
YKCDQCDYSAAVQSTLDKHLAKH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
387
409
YMCRECEYRTAHQSHLSRHMRVH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
415
437
YKCDLCDYSAAQKGHLVQHLTKH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
443
465
YMCGECGHRTAQMSDLSKHMRTH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
471
493
YKCEQCDFSAIDKSKLKQHQVKH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
501
523
YMCGECGYKTAYSSLLSRHMRTH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
529
551
YKCDQCDYSAAEKHHLIDHQTRH
estExt_fgenesh2_pg.C_340199
C2H2 ZF
557
579
YKCGECGYRAAQRSTLSRHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found