CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_4420015
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_4420015
T138713_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
161
183
YKCPQCSFRTPMKLLLDEHMAKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
189
211
YKCRKCKYRTTTKYNLIRHRKIH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
226
247
VCGECGYKYTSNSKMLRHMKIH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
262
284
FMCEECGYKTTTSARLSSHKTTH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
319
340
VCGVCGFRTAYQAHLYKHMKTH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
345
368
YSCDQCDYAAYQKAHLDRHIKAKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
387
409
FKCDQCDFCTAYKHSLKNHMAQH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
415
437
FMCEICGFRTADHSSFSNHMREH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
442
464
HKCELCDYRTTWKANMVTHMVKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
470
491
YMCDQCGYRSAYKSGLRSHMKT
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
513
535
YNCSECDYSSTRLRCFDMHMAKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
541
563
YICVECGYETASKSGLSRHKKIH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
597
619
YTCEECGYKSATSSSLSRHRRIH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
653
675
YTCGECEFRTAYKCHLSRHKRIH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
681
703
YRCNLCDYSANQKGHLDRHMTKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
709
731
YMCDVCGFRSSTKSNLSNHTKLH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
760
782
FKCVECDFCTARKDSLKTHMAKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
788
810
YMCEKCGVQTAHHSQLTHHMKLH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
816
838
HKCDLCDYSSIWSGNLAKHMVKH
estExt_fgenesh2_pg.C_4420015
C2H2 ZF
844
866
YMCDQCGYRSAYRSGLTSHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found