CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_4680014
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_4680014
T138715_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
278
301
HTCNECGKVCTTYGNLMQHQKNKH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
307
329
FECEVCHQKFAQQGHFIRHQRLH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
337
361
FQCNICEDKSFGTVSQLTQHLKTDH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
372
395
CRCKLCKELFVRTPELIRHVQKMH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
403
425
YKCDECDKPFKDVWKLNRHKMKH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
431
453
FQCEICGAQFIAEDLLNTHQKRH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
459
481
HECEYCNMKFVEAGRLKEHIRKH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
487
509
FPCTYCDMKFAHPNNLRIHTRKH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
543
565
YQCQECGKRHRTKAGLDMHVRKH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
571
593
FTCKYCQKGFWGKTDLVRHIRTH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
599
621
YMCDVCGSRFAMSSQMYSHRRTH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
627
649
HRCDDCGMNFKDPYHLKRHRRIH
estExt_fgenesh2_pg.C_4680014
C2H2 ZF
655
677
YHCPLCGKGYTRSDKLKDHVKQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found