CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_480034
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_480034
T138717_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_480034
C2H2 ZF
17
39
YVCGVCGFNTTNAHYLSQHRKGH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
45
67
FMCGQCGYRARHKYRLVRHMRTH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
73
95
FKCNHCNYNTSQKRYLVEHMKTH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
101
123
YICEICDYRTFKKSRLETHMMCH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
129
151
YKCEECDYRTTRHSHVTRHMRLH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
157
180
YSCQECDYKAKEKAKLNRHIRVKH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
200
222
FICGECGYRARLKHRLVEHMRTH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
228
250
FKCNHCNYKTSLKRTLDEHVKRH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
284
306
YKCEECDFRTAHSTALTRHRRCH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
312
335
YSCQECDYKTRVKCNLLKHMKRKH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
360
382
FMCGECGYRARHKYQLVGHMRTH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
388
410
FKCNQCSYKTSFKRNLDKHMKRH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
416
438
YSCELCVYQTFRKSAFEAHKMGH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
444
466
YKCEECDYSTAYKSDLIKHGRRH
estExt_fgenesh2_pg.C_480034
C2H2 ZF
472
495
YSCQKCDYKATVISNLFSHMRKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found