CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_550032
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_550032
T138728_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_550032
C2H2 ZF
50
72
FRCEECSRQFSQLGNLKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
78
100
YRCEECSRKFSQMSGLKSHTQAH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
106
128
YQCEECSRQFSQLVRLKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
134
156
YRCEECSRKFNELGTLKSHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
162
184
YRCEECSKQFSQPGDVKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
190
212
YRCEECSRQFSVLGNLKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
218
240
YRCGECSRQFSQLGHLKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
246
268
YKCEECSRKFSQMSGLKSHMQAH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
274
296
YQCEECSRQFSQLVRLKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
302
324
YRCEECSRKFNELGTLKSHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
330
352
YRCEECSKQFSQPGDLKTHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
358
380
YRCEECSRQFSLLGDLKSHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
389
408
EECSRQFSQLDDLKRHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
414
436
YMCEECSRQFSQLSTLKKHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
442
464
YRCEECSRQFSQLSTLKKHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
470
492
YRCEECSRQFNELDNLEKHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
498
520
YKCEECSRQFSRLSNLKRHMRTH
estExt_fgenesh2_pg.C_550032
C2H2 ZF
555
576
FKCEDCSKQFGMWCDLKRHMQT
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found