CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_670088
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_670088
T138743_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_670088
C2H2 ZF
30
52
YMCGECGYKTAWRSNLSQHRRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
58
80
YKCDQCDYSAAQKSSLAIHLAKH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
86
108
YMCGECGYRTAQKFILSRHMKTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
114
136
YKCNQCDYSATCKSNLDRHLAKH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
142
164
YMCEECGFRAAQKSDLSIHVRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
170
192
YKCDQCDYSAAVKSTLDRHQAKH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
198
220
YICGECGYRSARKFDLSLHMRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
226
248
YKCDKCDYSAARKCHLDQHLAKH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
254
276
YMCGECGYRTAQKYRLSRHMRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
282
304
YKCDQCDYSAAEKANFDRHLANH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
310
332
YMCGDCGYRTTRKPDLAKHMRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
338
360
YKCDQCDYSALQKSDLYKHLVKH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
366
388
YMCGECGYRSALKSTLSKHMRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
394
416
YKCDQCDYSAAQTSALNQHLAIH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
422
444
YMCGECGYRTVKKCHLSEHMRTH
estExt_fgenesh2_pg.C_670088
C2H2 ZF
450
472
YKCDHCDYSAAVKSSLDRHLAQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found