CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pg.C_840118
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_840118
T138756_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_840118
C2H2 ZF
9
31
YRCEACDRQFGRLGDLKRHVRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
38
60
YRCEACGKQFGKLYSLKTHIRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
66
88
FRCEACGKDFRQIQHLKRHVRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
94
116
YRCEECGRLFSQLGHLKTHVRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
122
144
YKCKQCGKLFSQPSHLKTHIRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
150
172
YRCEECNRQFSQPGDLKSHNRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
178
200
YKCEECSKQFRRLFNLKTHMRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
206
228
YMCEKCGIQFNVLRNLKTHMRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
234
253
YMCKACGRQFSHLKTHIRTH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
259
281
YRCEACGKHFRQFQHLKRHVRSH
estExt_fgenesh2_pg.C_840118
C2H2 ZF
287
309
YTCEECGRQFSQPSHLKTHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found