CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_1780006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_1780006
T138767_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
9
31
FLCDECDRPFLSRSALIQHKRTH
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
37
59
FACKDCPKTFAQKTTLIRHCRSH
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
65
87
FVCDLCQKRFSEKGNMLTHRRIH
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
93
115
FKCETCETRFGKLSTLIQHRRQH
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
123
146
FVCGVCNASYTQKSHLVSHQKLKH
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
152
174
FSCSVCSAQFDNKFHFTRHQRTH
estExt_fgenesh2_pm.C_1780006
C2H2 ZF
180
202
FQCDTCHSRFALKANLQRHQSLH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found