CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_210007
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_210007
T138770_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_210007
C2H2 ZF
10
32
CRCEECGWQFRTLRELESHMRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
38
60
YSCENCNKSFSHMDTLRKHMRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
66
88
YRCEQCEKQFSELGSLKRHVRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
94
116
YRCEECNKQFTDSGSLKKHMRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
122
144
YRCEKCNKQFTISGNLNKHMRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
150
172
YTCEKCSKQFSALSSLKKHMRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
178
200
YSCKECNKQFSQSSQLKEHVKTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
206
228
YKCEKCDKRCSKLGNLKSHMLTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
235
257
YKCEECSKQFIHQKSLKNHMKTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
265
287
YRCDECSRQFGSLSHLKSHMMTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
293
315
YRCEECSRQFRRLDDLKRHIRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
321
343
YRCEECNKHFSEKGSLQIHVRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
349
371
YSCLKCSKRFSDRGHRNKHMRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
377
399
YRCEQCSKQFSQLGNLRRHIKTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
405
427
FRCEKCSKQFSQLVALNRHMLIH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
433
455
YPCDTCDKRFNDPSSLTKHIRTH
estExt_fgenesh2_pm.C_210007
C2H2 ZF
461
483
FKCETCDKRFAESGTLKKHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found