CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_2260004
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_2260004
T138771_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
1
22
MCDECGYKARDKHRLDEHMRTH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
28
50
FRCNECDYKTSYKRSVVRHMKKH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
87
110
YKCEECDYSTARKPDFTRHRRKRH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
172
194
YSCDICKYKTYKMAHMERHMMYH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
200
223
YKCEECDYRTVAKSDIIRHMRRKH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
233
255
YLCDFCGYTTSYKQNFSRHRQRH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
261
283
FMCAECGYRASNKRRLIDHMRKH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
289
311
FKCNQCHYQASYKTLLVQHMKTH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
317
339
YSCELCEYKTFHRSHINRHMKYH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
345
367
YKCEECNYSAVDKNSLTKHRRRH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
372
394
FMCGECGYRASNKPRLVDHMRKH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
400
422
FKCNQCHYQASYKSLLVKHMKKH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
428
450
YCCDICEYKTYNWSHIKRHMKYH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
456
478
YKCEQCDYSAVVKDNLTKHMKCH
estExt_fgenesh2_pm.C_2260004
C2H2 ZF
484
507
YCCKKCSFKASQKASLVKHMITKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found