CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh2_pm.C_2850005
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_2850005
T138776_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
14
36
FRCEDCNKQFSGLSQLKIHMRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
42
64
YRCDECSKQFSKLCHLKQHMKNH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
70
92
YKCEECNRQFSQLGSLKSHIRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
98
120
YRCKECGRQFSQLCDLKRHMRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
126
148
YRCDECSKQFRVLCHLKKHMRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
154
176
YRCEECSKQFSQLCHLKQHIKTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
182
204
YKCEECGKQFRELSKLKIHIRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
210
232
YKCEECGKQFSQLGDLKSHRRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
238
260
YKCEECSKQFSTLSNLKRHMRTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
266
288
YRCDECSKQFSVLYSLKQHMKTH
estExt_fgenesh2_pm.C_2850005
C2H2 ZF
294
316
YKCEECSRQFSRWGHLKKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found