CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_3160009
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_3160009
T138779_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
10
32
YGCGECGRRFSDGTALRKHKLTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
38
60
YSCEECGKTFGLPATLNRHMLTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
66
88
HSCVECGVQFSRTDALKNHMQTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
94
116
HICKECGQQFRQLGHLRKHKQTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
130
152
FECDKCGKTFKTPRNLRRHAATH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
158
180
YKCDECGKGFRDKQGLGRHVPIH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
186
208
FKCDQCSNSYSVERYLKRHMVTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
214
236
YSCEDCGKRFQDREGLARHMRTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
242
264
FQCDECGKRFGQHSSLTLHKRTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
270
293
FPCDKCSKQFSQLAHLKRHLMSIH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
298
320
HPCDVCGKTFKKRGVLKSHVRIH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
326
348
YGCEDCDKRFRDAETLRRHKITH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
354
376
FICDQCGKGFNRSQHLKTHMMTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
382
404
HVCPECGKGFYDSGGLKDHLMTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
410
432
FMCDECGKQFRQAAALRVHLKTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
438
460
YICSKCGKQCIQLAHLQRHMLIH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
466
488
HACGECNKRFRTPTDLKKHGQVH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
494
516
YTCDECNGQFSQPNALKRHKRTH
estExt_fgenesh2_pm.C_3160009
C2H2 ZF
522
544
YSCRFCSRKFSRQDHHKTHERTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found