CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_370036
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_370036
T138781_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_370036
C2H2 ZF
10
32
YGCEECGKLFSQLGHLKTHVRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
38
60
YSCEECGKQFSQMGHLKIHMRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
74
96
CMCEECGKQFTRLGDLKKHMRIH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
102
124
HPCDVCNKRFRQKIHLKRHMRSH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
162
184
YQCVECSKQFTSQADLKRHARTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
190
212
YKCDVCNRGFSTLNNMETHKRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
218
240
YRCDVCSMSFGYQNALKFHMRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
246
268
YKCEECGKQFSRRFVLKEHIRIH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
274
296
YRCEECSKQFSRLSELKLHVRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
302
324
YKCEECSKQFSQLGDLKKHVRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
330
352
FKCDECGKKFSQRNHLNIHIRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
358
380
YRCEECGKQFVQLGRLKIHMRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
386
408
YRCEECSKQFTQLSHLWGHMRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
414
436
YKCEECSKQFGHLHHLRAHKRTH
estExt_fgenesh2_pm.C_370036
C2H2 ZF
442
465
FSCEECGKRFSQFCNLKRHIQSHH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found