CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pm.C_960019
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pm.C_960019
T138789_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pm.C_960019
C2H2 ZF
12
34
YKCEECSRQFSRLSHLKQHINTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
40
62
FRCEECSRQFSRLSYLKKHIQTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
68
90
YTCEECSRKFSELGNLKKHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
96
118
YKCEECSRQFRRLGHLKAHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
124
146
YRCEECSRQFSRLDCLRGHMKTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
152
174
YKCEECSKQFSHLGSLQNHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
180
202
YMCEECSRQFSQLSNLKKHMQTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
208
230
YKCEECSKQFSQLGNLKTHMHTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
236
258
YRCAKCSRQFSDLVSLKTHIRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
264
286
YNCEECSKQFSHLGSLQKHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
292
314
YMCEECNRQFSELGHLKRHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
320
342
YKCEECSKLFSRPEELKKHLYAH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
348
370
YKCEECSKQFSQLSYVKEHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
376
398
YKCEECSKQFSQLSNLKTHIKSH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
404
426
YKCEECSKQFSQLAHLKGHMRTH
estExt_fgenesh2_pm.C_960019
C2H2 ZF
432
456
YKCEQCSKQFSQLSNLKTHIKSKLH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found