CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh5_synt.C_120011
(
Volvox carteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh5_synt.C_120011
T138802_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh5_synt.C_120011
C2H2 ZF
364
390
SCSVCDSQGRRPFGTINLLLAHLRSAH
estExt_fgenesh5_synt.C_120011
C2H2 ZF
427
449
RCEYCNLVFYGRDELYGHMTQRH
estExt_fgenesh5_synt.C_120011
C2H2 ZF
450
479
FTCHVCSRLGRHHLYFPDADTLLIHLREEH
estExt_fgenesh5_synt.C_120011
C2H2 ZF
480
508
YTCDHPDCFGCMIAFATRDELNTHIRDRH
Links
Other
C2H2 ZF
family TFs
Other
Volvox carteri
TFs
0 Related TFs
">No related TF found