CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshNG_pg.C_350148
(
Naegleria gruberi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgeneshNG_pg.C_350148
T138827_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshNG_pg.C_350148
C2H2 ZF
78
101
YACVMCNCTFHKKSQLRAHVLDAH
estExt_fgeneshNG_pg.C_350148
C2H2 ZF
133
157
YKCPHQSCGKEFYSEGKLDKHLKKH
estExt_fgeneshNG_pg.C_350148
C2H2 ZF
162
187
HLCGFPSCGKQFSFRHELLDHIKDMH
estExt_fgeneshNG_pg.C_350148
C2H2 ZF
192
215
SVCTICNKEFKDLQSLQVHLRTIH
estExt_fgeneshNG_pg.C_350148
C2H2 ZF
222
247
FRCHYDGCNKFYTNKRNLDDHIKTTH
estExt_fgeneshNG_pg.C_350148
C2H2 ZF
253
276
FKCDICQRILKHKASLRRHYKNIH
Links
Other
C2H2 ZF
family TFs
Other
Naegleria gruberi
TFs
0 Related TFs
">No related TF found