CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_GenewiseH_1.C_10060002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_10060002
T138893_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_10060002
C2H2 ZF
10
32
YKCGHCNISFKQKKSLDRHLATH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
38
60
YTCNKCEYKTADKSGLSQHMKQH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
66
88
YKCDQCDYSALRKCLLDQHMAKH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
94
116
YLCEKCGFRTANSFCLSNHMTTH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
122
144
YKCDQCDFAAGQKPTLQRHKLRH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
150
172
YKCGECEYRTITRSNLSVHMRQH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
178
200
YKCEHCDYSAAQKGLLNQHMAKH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
207
229
YKCEECDFRTDGKSKLTEHVRKH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
235
257
YKCDICNYSAAWKLSLAAHLRKH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
263
285
YKCDLCDYSAAVKRRLDQHMTKH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
291
313
YVCEECGYGTVSKSHLTIHLRKH
estExt_GenewiseH_1.C_10060002
C2H2 ZF
319
341
YKCDMCDYSAAHANSLKLHKKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found