CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_GenewiseH_1.C_2850087
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_2850087
T138895_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_2850087
C2H2 ZF
24
46
HKCSYCDKEFCLKSRLILHLQTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
52
74
YQCDDCGKRFSQLGHLKGHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
80
102
YRCEECSKQFNRLGTLKIHMRNH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
108
130
YRCEACSKQFSRFGTLKIHIRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
136
158
YQCDDCGKRFSQQSNLEDHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
164
186
YECEYCNKCFSQSAHLKKHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
192
214
YRCEACCKQFSTLGILNKHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
220
242
YRCDACSKQFSDLSGLKKHMWTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
248
270
YSCEECSKQFSDPSRLKVHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
276
298
YRCEQCSKQFTQFPNLKRHIRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
304
326
YKCEECSKQFIQLSHLKSHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
332
354
YSCGNCGKQFSMPSHLKIHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
360
382
YRCDECSKQFSQLCSLKRHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
388
410
FRCDECCKQFSLLGSLEKHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
416
438
YRCAECGRQFSQLGDMKRHIKTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
444
466
YKCEECSKRFTELSQLKRHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
472
494
YKCEECDRQFSHLGNLKSHMQIH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
500
522
YRCDECNKQFRVVGYLKSHMRTH
estExt_GenewiseH_1.C_2850087
C2H2 ZF
528
550
YKCEECSKQFSQLCNLKLHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found