CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_GenewiseH_1.C_320256
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_320256
T138897_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_320256
C2H2 ZF
80
102
FACTECDYRAATKTELLRHTRRH
estExt_GenewiseH_1.C_320256
C2H2 ZF
108
130
YKCGECGYRTADRSALTVHTRKH
estExt_GenewiseH_1.C_320256
C2H2 ZF
136
158
YKCDLCDYSAAEKGTLDQHMTTH
estExt_GenewiseH_1.C_320256
C2H2 ZF
164
186
YMCGECGYRTASRSRLSQHMRTH
estExt_GenewiseH_1.C_320256
C2H2 ZF
192
214
YKCDQCDYSAAQKSNLDQHMAKH
estExt_GenewiseH_1.C_320256
C2H2 ZF
220
242
YMCGECGYRTAFRSNLSVHMRTH
estExt_GenewiseH_1.C_320256
C2H2 ZF
248
270
YKCAKCDYSAAKKYHIESHMAKH
estExt_GenewiseH_1.C_320256
C2H2 ZF
276
298
YMCVECGYRTAHMSYLSVHMRSH
estExt_GenewiseH_1.C_320256
C2H2 ZF
332
354
YMCGECGYRTANRSYLTVHMRSH
estExt_GenewiseH_1.C_320256
C2H2 ZF
360
382
YKCDQCDYSTAQKSNLDRHMAIH
estExt_GenewiseH_1.C_320256
C2H2 ZF
388
410
YMCGECGYRVADKYTLTVHMRTH
estExt_GenewiseH_1.C_320256
C2H2 ZF
416
438
YKCDQCDYSATTKSYLDKHMVRH
estExt_GenewiseH_1.C_320256
C2H2 ZF
444
466
FMCGDCGYRTAFRSSLSKHMRKH
estExt_GenewiseH_1.C_320256
C2H2 ZF
472
494
YKCDQCNFSAARKGNLDEHMTTH
estExt_GenewiseH_1.C_320256
C2H2 ZF
500
522
YMCGECGYRTARKPNLSRHMVKH
estExt_GenewiseH_1.C_320256
C2H2 ZF
528
550
FVCGECGYKTAHKSNLTKHIRRH
estExt_GenewiseH_1.C_320256
C2H2 ZF
556
578
YKCHQCDFSAAQKGDLDQHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found