CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_GenewiseH_1.C_3580002
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_3580002
T138901_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_3580002
C2H2 ZF
10
32
YRCEECGKTFRQSNGLQRHIRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
38
60
YKCEECDRQFNTITNLKTHMRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
66
88
YQCEVCKKRFAHIDSLKIHVRKH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
94
116
FKCEVCGNQFSQRSHLKTHMATH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
122
144
YQCDKCKKRFRQSSHLKVHMRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
150
172
YKCDECGKQSTTLEGLAVHTRVH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
178
200
YKCEECSKQFVTLSQLKSHMRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
206
228
YKCEECDKRFATPSSLKLHMRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
234
256
YTCEECSKQFTSMSHLKAHMRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
262
285
YSCERCGKQFTCSSSLKTHIMRAH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
291
313
HHCEECDKQFVSLSDLKVHMRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
319
341
YKCEECDKQFASPSYLKAHIRTH
estExt_GenewiseH_1.C_3580002
C2H2 ZF
347
369
YKCEECDRQFITRAHLKRHMNTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found