CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_GenewiseH_1.C_5170006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_5170006
T138905_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_5170006
C2H2 ZF
13
36
CKCPDCAQTFRTVSLLRLHVRRKH
estExt_GenewiseH_1.C_5170006
C2H2 ZF
42
64
FQCPHCDYAALVSSHLERHILRH
estExt_GenewiseH_1.C_5170006
C2H2 ZF
70
92
FMCEECGYMAVTKDLLTNHRRTH
estExt_GenewiseH_1.C_5170006
C2H2 ZF
98
120
YRCELCDYAASRRHHLQGHMAKH
estExt_GenewiseH_1.C_5170006
C2H2 ZF
129
151
FKCEFCDYAAVRKFHLVRHMTRH
estExt_GenewiseH_1.C_5170006
C2H2 ZF
157
179
FKCNMCEYSTVDNSRLQAHIRAH
estExt_GenewiseH_1.C_5170006
C2H2 ZF
185
208
FRCSTCDFATARKDHLKQHMTCRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found