CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_GenewiseH_1.C_6350063
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_6350063
T138907_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_6350063
C2H2 ZF
1
22
MCGECGYRAAQKASLSVHMRTH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
57
79
YMCGECGYRTVQKSTLSIHMRIH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
85
108
YKCDQCDYSAKQKFHLDYHKAKKH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
114
136
YMCGECGYRTVQRSELSIHMRTH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
171
193
FMCGECGYRTTTKSTLAIHMQIH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
199
222
YKCDQCDYSATQKATLDNHIAAQH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
228
250
YMCGECGYRTSRKFALTRHMRTH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
256
278
YKCGECGYRTVQKSHLSRHMRTH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
284
307
YKCDQCDYSAAQKVHLDLHVAAKH
estExt_GenewiseH_1.C_6350063
C2H2 ZF
313
335
YKCDKCGYRTARKSDLSKHMEIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found