CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_2980030
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_2980030
T138919_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_2980030
C2H2 ZF
35
58
YSCKHCSYQSNWPSGLQMHVRRAH
estExt_gwp.C_2980030
C2H2 ZF
64
86
YKCPHCEYTGAAKSDVDIHMVRH
estExt_gwp.C_2980030
C2H2 ZF
92
114
FMCGECGFRTGHKSTLVVHMRIH
estExt_gwp.C_2980030
C2H2 ZF
120
143
YKCSQCDYTSRYKRSLNVHTRHAH
estExt_gwp.C_2980030
C2H2 ZF
149
171
HKCPDCDYKTAQKPNLIRHLRKH
estExt_gwp.C_2980030
C2H2 ZF
205
228
YLCEVCGYKTANRQHFDIHTTRRH
estExt_gwp.C_2980030
C2H2 ZF
234
256
YACPLCDYRGALKVDVDRHMVRH
estExt_gwp.C_2980030
C2H2 ZF
262
285
HQCELCGWKTGHMSSYYRHMRLKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found