CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_350110
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_350110
T138924_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_350110
C2H2 ZF
25
47
NKCSTCDKQFRCRSALVKHLRTH
estExt_gwp.C_350110
C2H2 ZF
53
75
YRCEECNKQFSQLSNLKSHIRYH
estExt_gwp.C_350110
C2H2 ZF
81
103
YRCEQCSKQFSDPSSLKKHIRTH
estExt_gwp.C_350110
C2H2 ZF
109
131
YRCEECSKQFSVLSSLKSHMRTH
estExt_gwp.C_350110
C2H2 ZF
137
159
YRCEKCSRHFGQLCRLKKHMRTH
estExt_gwp.C_350110
C2H2 ZF
165
187
YRCEECSRQFSELGNLKKHMGTH
estExt_gwp.C_350110
C2H2 ZF
193
215
YACEECSRQFSNLSNLETHMRTH
estExt_gwp.C_350110
C2H2 ZF
221
243
YSCEQCSKQFSQLSALKTHIRTH
estExt_gwp.C_350110
C2H2 ZF
249
271
YRCDQCSKQFSQMNSLQKHIRTH
estExt_gwp.C_350110
C2H2 ZF
277
299
YTCEQCSRQFSERGSLKKHMRIH
estExt_gwp.C_350110
C2H2 ZF
305
327
YRCEQCSKQFRNLGHLKNHMRTH
estExt_gwp.C_350110
C2H2 ZF
333
355
YRCEECGRQFSESGSLKTHMKTH
estExt_gwp.C_350110
C2H2 ZF
361
383
YKCEQCSKQFSQLGHMKTHMRTH
estExt_gwp.C_350110
C2H2 ZF
389
411
YKCEECSRQFCELGQLKSHMRTH
estExt_gwp.C_350110
C2H2 ZF
417
439
YSCKVCGRGFRHKGNLNVHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found