CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_3650041
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_3650041
T138925_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_3650041
C2H2 ZF
10
32
FKCGECRYSTASRSSLSDHMKRH
estExt_gwp.C_3650041
C2H2 ZF
40
61
FKCADCGYKTTNESYFSNHTKS
estExt_gwp.C_3650041
C2H2 ZF
68
90
YKCGECGFSTAYKASLSHHMRRH
estExt_gwp.C_3650041
C2H2 ZF
96
117
LVCADCGYKAPHSQGLSDHMKS
estExt_gwp.C_3650041
C2H2 ZF
124
146
HKCGECGYSTTNKSHLSAHMQRH
estExt_gwp.C_3650041
C2H2 ZF
152
174
FMCGECGYRTTTKSCLSQHMRTH
estExt_gwp.C_3650041
C2H2 ZF
180
202
YKCDQCDYSAAQKSSLDAHRLKH
estExt_gwp.C_3650041
C2H2 ZF
220
242
FMCGECGYRTTTKSRLSKHMRTH
estExt_gwp.C_3650041
C2H2 ZF
248
270
YKCDLCDYSAAQKCNLDVHRLKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found