CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_gwp.C_4070090
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_4070090
T138929_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_4070090
C2H2 ZF
1
22
MCDRCGYRTAYKSHLSRHIKTH
estExt_gwp.C_4070090
C2H2 ZF
51
73
YMCGECGYRTAYRSDLSRHMRTH
estExt_gwp.C_4070090
C2H2 ZF
79
101
YKCDQCDYSAARRSALEEHKAKH
estExt_gwp.C_4070090
C2H2 ZF
107
129
FMCGECGYRAARKSHLSQHMRSH
estExt_gwp.C_4070090
C2H2 ZF
135
157
YRCDHCDYSAADKSALAKHLVKH
estExt_gwp.C_4070090
C2H2 ZF
163
185
YMCGECGFRTTQKSHLSRHMRTH
estExt_gwp.C_4070090
C2H2 ZF
191
213
YRCDQCAYSAADKYTLDQHQRKH
estExt_gwp.C_4070090
C2H2 ZF
219
241
YKCDQCDYSATEKSSLVKHIRKH
estExt_gwp.C_4070090
C2H2 ZF
247
269
YMCGECGFRTAMKCNLSVHIRSH
estExt_gwp.C_4070090
C2H2 ZF
275
297
YKCDQCEYSAAHKSTLDQHLEKH
estExt_gwp.C_4070090
C2H2 ZF
303
325
FMCGECGYRAAQWQHLYRHMRTH
estExt_gwp.C_4070090
C2H2 ZF
331
353
YKCEQCDYSAAQKGHLDRHLMKH
estExt_gwp.C_4070090
C2H2 ZF
359
381
FMCDECGYRTARKSTLIRHMRSH
estExt_gwp.C_4070090
C2H2 ZF
387
409
HKCDQCDFSAAQKHHLINHQTRH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found