CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_4420070
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_4420070
T138932_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_4420070
C2H2 ZF
10
34
YKCSYEGCQWAFTTAYKLKRHEQSH
estExt_gwp.C_4420070
C2H2 ZF
40
64
YKCELAGCGKRFTTIYNLKHHMKGH
estExt_gwp.C_4420070
C2H2 ZF
71
94
VCTYENCGQTFKSKYKLQMHMRKH
estExt_gwp.C_4420070
C2H2 ZF
101
125
FRCDFPGCGKTFVTASSFGSHHRIH
estExt_gwp.C_4420070
C2H2 ZF
132
156
FTCSFEGCNKKFDKACRLKLHMRSH
estExt_gwp.C_4420070
C2H2 ZF
162
186
FVCGVEGCGWSFVCVSKLKRHMSKH
estExt_gwp.C_4420070
C2H2 ZF
192
216
FMCTEEGCGKCFTRSEHLKGHMITH
estExt_gwp.C_4420070
C2H2 ZF
222
246
YKCSFPDCDASFSARSSLYVHTKKH
estExt_gwp.C_4420070
C2H2 ZF
258
283
YDCPVDGCDKTYRNKSSLNSHILKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found