CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_4490080
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_4490080
T138933_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_4490080
C2H2 ZF
17
39
YKCDQCDYSAAQKCHLDRHVAKH
estExt_gwp.C_4490080
C2H2 ZF
45
67
YMCEVCGYRTAQRSNLSVHMRKH
estExt_gwp.C_4490080
C2H2 ZF
73
94
YKCDQCDYSTSHKCNLDRHIKH
estExt_gwp.C_4490080
C2H2 ZF
100
122
YKCDQCDYSAAQKVHLDRHMTKH
estExt_gwp.C_4490080
C2H2 ZF
128
150
YMCGECGYSAAIRCRLLEHMRIH
estExt_gwp.C_4490080
C2H2 ZF
156
178
YKCDQCNYASASKYSLDQHMTKH
estExt_gwp.C_4490080
C2H2 ZF
184
206
LMCGECGFRTADRSNLSRHMRSH
estExt_gwp.C_4490080
C2H2 ZF
212
234
YKCGQCDYSTTHKSALNRHMAKH
estExt_gwp.C_4490080
C2H2 ZF
240
262
YMCDDCGYRTADKSYLTRHMRTH
estExt_gwp.C_4490080
C2H2 ZF
268
290
YKCDQCDYSAAHKASLDLHLTKH
estExt_gwp.C_4490080
C2H2 ZF
298
320
FMCGQCEYRTAIRSHLSEHMRTH
estExt_gwp.C_4490080
C2H2 ZF
326
350
YKCDQCDYSASCKGNLVKHIHIRTH
estExt_gwp.C_4490080
C2H2 ZF
356
378
YKCDQCDYSTAHKSALNRHMAKH
estExt_gwp.C_4490080
C2H2 ZF
384
406
YMCDDCGYRTADRSNLSVHMRKH
estExt_gwp.C_4490080
C2H2 ZF
412
434
YKCDQCDYSASHKCNLATHMYKH
estExt_gwp.C_4490080
C2H2 ZF
440
462
YMCGDCGFRTADRSYLTVHMRKH
estExt_gwp.C_4490080
C2H2 ZF
468
490
YKCDQCDYSAAQKCHLDQHMAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found