CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_5300006
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_5300006
T138936_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_5300006
C2H2 ZF
12
34
VKCPECEFTTESTKRMNQHMTTH
estExt_gwp.C_5300006
C2H2 ZF
40
62
FACKLCDYRGRKKGHLQGHMRVH
estExt_gwp.C_5300006
C2H2 ZF
68
91
HKCRECSFTCKFRGTLTQHMAMTH
estExt_gwp.C_5300006
C2H2 ZF
96
118
LLCEQCGFRTTGGYALKVHMRKH
estExt_gwp.C_5300006
C2H2 ZF
124
147
YKCSECSAAYRASKGLERHHKTCH
estExt_gwp.C_5300006
C2H2 ZF
153
175
YACKKCEYRGRKKAHLQDHMKVH
estExt_gwp.C_5300006
C2H2 ZF
181
204
YKCRECDFSSRLSSQLSLHMKKEH
estExt_gwp.C_5300006
C2H2 ZF
213
234
LCELCGYKAERPYMLKLHRYKH
estExt_gwp.C_5300006
C2H2 ZF
269
291
YKCAHCSHFAKTRSLLRKHERTH
estExt_gwp.C_5300006
C2H2 ZF
296
318
YPCKLCDYRAKRKIDLATHMRTH
estExt_gwp.C_5300006
C2H2 ZF
324
346
LKCSKCPFATSLPPELKRHEAGH
estExt_gwp.C_5300006
C2H2 ZF
353
374
MCDICQFTARSKNSLAEHKKLH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found