CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_gwp.C_620135
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_620135
T138938_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_620135
C2H2 ZF
10
32
HRCEECNRQFSLLSILKTHMRTH
estExt_gwp.C_620135
C2H2 ZF
38
60
YKCEECSKRFTQSCALKRHMRTH
estExt_gwp.C_620135
C2H2 ZF
66
88
YRCEECSRQFRDLGDLKKHMLTH
estExt_gwp.C_620135
C2H2 ZF
94
116
YKCETCSRQFAHPTSLKMHLRTH
estExt_gwp.C_620135
C2H2 ZF
122
144
YKCEKCSRQFSQPGALKMHMRTH
estExt_gwp.C_620135
C2H2 ZF
150
172
YRCDECSKQFIRLERLKNHMRAH
estExt_gwp.C_620135
C2H2 ZF
178
200
YRCQECSRQFSFSTNLKSHMKTH
estExt_gwp.C_620135
C2H2 ZF
206
228
YRCEECSQHFSDKGTLKIHMRTH
estExt_gwp.C_620135
C2H2 ZF
234
256
YRCEECSRQFSRLFRLKQHIRTH
estExt_gwp.C_620135
C2H2 ZF
262
284
YGCEECNKRFSRLDHLKTHMKTH
estExt_gwp.C_620135
C2H2 ZF
290
312
YVCEECSKQFSDLYSLKSHIKTH
estExt_gwp.C_620135
C2H2 ZF
318
340
YRCDECSKQFSHLGSLKSHMRSH
estExt_gwp.C_620135
C2H2 ZF
346
368
YTCEECSKQFSHIGNLKSHMKTH
estExt_gwp.C_620135
C2H2 ZF
374
396
YRCEECSQHFSDKGTLKIHMRTH
estExt_gwp.C_620135
C2H2 ZF
402
424
YRCEECSRQFSRLFRLKQHMRTH
estExt_gwp.C_620135
C2H2 ZF
430
452
YRCQECSKRFSQLDHLKSHMKTH
estExt_gwp.C_620135
C2H2 ZF
458
480
YICEECSKQFSELRSLKNHMRTH
estExt_gwp.C_620135
C2H2 ZF
486
508
YKCEECSRHFSELGSLKIHIRTH
estExt_gwp.C_620135
C2H2 ZF
514
536
YRCEECSKQFSHLGNLKSHMKTH
estExt_gwp.C_620135
C2H2 ZF
542
564
YRCEECSRQFSHLCTLKKHRKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found