CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22000715m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22000715m.g	T140358_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22000715m.p	C2H2 ZF	22	44	YPCDICGKVFSTRGELTTHKRIH
Ocbimv22000715m.p	C2H2 ZF	50	72	YQCDICGKAFPQNHHLITHKRIH
Ocbimv22000715m.p	C2H2 ZF	78	100	YHCDTCGKSFPQNGHLTKHKRIH
Ocbimv22000715m.p	C2H2 ZF	106	128	FHCEICGKSYSRNDELTIHKRVH
Ocbimv22000715m.p	C2H2 ZF	134	156	YQCDICGQSFTRKDSLTTHKRVH
Ocbimv22000715m.p	C2H2 ZF	162	184	YQCDICGKSFSKNTNLTDHKRIH
Ocbimv22000715m.p	C2H2 ZF	190	212	YHCDICGRSFTQNNQLTKHKRIH
Ocbimv22000715m.p	C2H2 ZF	218	240	YRCDICDESFSRNDELTTHKRFH
Ocbimv22000715m.p	C2H2 ZF	246	268	YHCTICGKLFSGAINLTLHKRIH
Ocbimv22000715m.p	C2H2 ZF	274	296	YQCDICGKSFPQHGHLSKHKRIH
Ocbimv22000715m.p	C2H2 ZF	302	324	YHCDTCGKSFLQSDHLSKHKHIH
Ocbimv22000715m.p	C2H2 ZF	330	352	YHCEICGKPFSRNDELTIHKRVH
Ocbimv22000715m.p	C2H2 ZF	358	380	YHCIICGKSFSRSNLLSGHKRIH
Ocbimv22000715m.p	C2H2 ZF	386	408	YHCDICGKSFTQSTAVTVHKRIH
Ocbimv22000715m.p	C2H2 ZF	414	436	YHCDICGKSFSRNSQLTKHKSIH
Ocbimv22000715m.p	C2H2 ZF	442	463	YHCNICDKSFSQHDGLTNHICI

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found