CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22001169m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22001169m.g	T140370_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22001169m.p	C2H2 ZF	66	88	FRCEICGKCLNSNGHLQTHKRIH
Ocbimv22001169m.p	C2H2 ZF	94	116	FHCEICGKCFTSNSHLKRHKKTH
Ocbimv22001169m.p	C2H2 ZF	122	144	FHCDICGNCFTQNSALKRHKRIH
Ocbimv22001169m.p	C2H2 ZF	150	172	FNCEICGESFGCGSTLRNHEVVH
Ocbimv22001169m.p	C2H2 ZF	178	200	FHCEICGKYFTTNGYLKIHERIH
Ocbimv22001169m.p	C2H2 ZF	206	228	FHCEICGKYFTHNSVLKRHKRRH
Ocbimv22001169m.p	C2H2 ZF	234	256	FHCEICGKCFTCNSALKTHERRH
Ocbimv22001169m.p	C2H2 ZF	262	284	FHCETCGKCFTCNSHLETHKRIH
Ocbimv22001169m.p	C2H2 ZF	290	312	LHCEICGKCFTCNSHLETHKRIH
Ocbimv22001169m.p	C2H2 ZF	318	340	FHCEICLKRFTSNNHLKQHKTIH
Ocbimv22001169m.p	C2H2 ZF	346	368	FNCEICGTCFTFNANLKRHKRIH
Ocbimv22001169m.p	C2H2 ZF	374	396	FNCEICGESFVCSSMLRKHEVVH
Ocbimv22001169m.p	C2H2 ZF	402	424	FHCEICGNCFTSYYYLKQHESIH
Ocbimv22001169m.p	C2H2 ZF	430	452	FHCEICGKGFISYYYLKQHESIH
Ocbimv22001169m.p	C2H2 ZF	458	480	FHCEICRKGFISNYYLKQHKIIH
Ocbimv22001169m.p	C2H2 ZF	486	508	FHCEICGKTFSCSGTLTRHKTVH
Ocbimv22001169m.p	C2H2 ZF	514	535	FNCEICGKCFITNAHLKQHKRN

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found