CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22001721m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22001721m.g	T140392_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22001721m.p	C2H2 ZF	49	71	INCEICGKSFASNRCLASHKKLH
Ocbimv22001721m.p	C2H2 ZF	77	99	FHCEVCGKSYAKNVQLVVHIRSH
Ocbimv22001721m.p	C2H2 ZF	105	127	YHCDACGKSFAIHSCLTNHKRIH
Ocbimv22001721m.p	C2H2 ZF	133	155	YHCDICGKSFVDKSYFTNHKRIH
Ocbimv22001721m.p	C2H2 ZF	161	183	YRCEICNKSFIAKSYLTRHKKIH
Ocbimv22001721m.p	C2H2 ZF	189	211	YHCDICGKSFAINSSLTNHKRIH
Ocbimv22001721m.p	C2H2 ZF	217	239	FHCKICEKSFVSNNYLMKHKRIH
Ocbimv22001721m.p	C2H2 ZF	245	267	YHCEICGKSFAVLNCLTNHKSLH
Ocbimv22001721m.p	C2H2 ZF	273	295	FHCKICEKSFVNKSYFTRHKKIH
Ocbimv22001721m.p	C2H2 ZF	301	323	YCCEICRKSFISKNHLTTHRRIH
Ocbimv22001721m.p	C2H2 ZF	329	351	FHCEICAKSFTTSYSLGVHKRIH
Ocbimv22001721m.p	C2H2 ZF	357	379	HDCEICGKSFLVKFHLIKHKRIH
Ocbimv22001721m.p	C2H2 ZF	385	407	FHCEICGMSFVDKSSLTSHKRVH
Ocbimv22001721m.p	C2H2 ZF	413	435	FFCDICEKYFSSNSNLTRHKIIH
Ocbimv22001721m.p	C2H2 ZF	441	463	FHCEICGKSYFNNCDLKRHKIKH
Ocbimv22001721m.p	C2H2 ZF	469	491	FHCEICGKSFFDNCSLTAHIRSH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found