CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22002628m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22002628m.g
T140416_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22002628m.p
C2H2 ZF
923
945
LACPVCFLSFQKQQDLIEHASVH
Ocbimv22002628m.p
C2H2 ZF
960
982
HKCQKCWKAFSNYERLQKHLLCH
Ocbimv22002628m.p
C2H2 ZF
990
1012
LQCQVCFKRFMNNSALSCHMKTH
Ocbimv22002628m.p
C2H2 ZF
1018
1040
YECPLCHSDFDQVGSLKSHVTEH
Ocbimv22002628m.p
C2H2 ZF
1047
1070
YNCPICTRVFDEFVTIRKHMRAFH
Ocbimv22002628m.p
C2H2 ZF
1075
1097
YPCPECDKLFPRPDKLKLHMLRH
Ocbimv22002628m.p
C2H2 ZF
1103
1126
FMCESCGRQFKRKDKLKEHMKRMH
Ocbimv22002628m.p
C2H2 ZF
1161
1184
YKCHTCLLGFKRRGMLVNHLAKRH
Ocbimv22002628m.p
C2H2 ZF
1206
1229
YYCQYCEKVYKSSSKRKAHILKNH
Ocbimv22002628m.p
C2H2 ZF
1267
1290
HQCDFCHKQYASKAKLMQHHRKKH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found