CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22003111m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22003111m.g
T140430_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22003111m.p
C2H2 ZF
9
31
YKCDICGKVLTTKSNLAIHRCTH
Ocbimv22003111m.p
C2H2 ZF
37
59
YNCEVCEKAFSVKAYLTEHKRTH
Ocbimv22003111m.p
C2H2 ZF
65
87
FHCEICGKSFSSKGYIKTHKRVH
Ocbimv22003111m.p
C2H2 ZF
93
115
YHCEICGKAFSEFSSARSHQLIH
Ocbimv22003111m.p
C2H2 ZF
121
143
YRCEICGKSFYQVNNLTRHKRIH
Ocbimv22003111m.p
C2H2 ZF
149
171
FKCDYCGKAFSNVSNFETHRGVH
Ocbimv22003111m.p
C2H2 ZF
175
197
FHCEICDKVFSVKESLTVHKRVH
Ocbimv22003111m.p
C2H2 ZF
203
225
YHCEVCGEGFRTSGTLIRHKRTH
Ocbimv22003111m.p
C2H2 ZF
231
253
HRCEICGKAFPEKYVLTLHKRIH
Ocbimv22003111m.p
C2H2 ZF
259
281
YHCEVCGRDFSGRCNLVHHKRIH
Ocbimv22003111m.p
C2H2 ZF
287
309
YHCEVCSKAFSQNGSLVRHRRIH
Ocbimv22003111m.p
C2H2 ZF
315
337
YRCLICGKEFSLKTSLTTHNRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found